Publication detail
Automatic Identification and Validation of Planar Collagen Organization in the Aorta Wall with Application to Abdominal Aortic Aneurysm
POLZER, S. GASSER, T. FORSELL, C. DRUCKMÜLLEROVÁ, H. TICHÝ, M. STAFFA, R. VLACHOVSKÝ, R. BURŠA, J.
Czech title
Automatická identifikace rovinné distribuce kolagenu ve stěně aorty s aplikací na aneurysma břišní aorty
English title
Automatic Identification and Validation of Planar Collagen Organization in the Aorta Wall with Application to Abdominal Aortic Aneurysm
Type
journal article - other
Language
en
Original abstract
Arterial physiology relies on a delicate three-dimensional (3D) organization of cells and extracellular matrix, which is remarkably altered by vascular diseases like abdominal aortic aneurysms (AAA). The ability to explore the micro-histology of the aorta wall is important in the study of vascular pathologies and in the development of vascular constitutive models, i.e., mathematical descriptions of biomechanical properties of the wall. The present study reports and validates a fast image processing sequence capable of quantifying collagen fiber organization from histological stains. Powering and re-normalizing the histogram of the classical fast Fourier transformation (FFT) is a key step in the proposed analysis sequence. This modification introduces a powering parameter w, which was calibrated to best fit the reference data obtained using classical FFT and polarized light microscopy (PLM) of stained histological slices of AAA wall samples. The values of w = 3 and 7 give the best correlation (Pearson's correlation coefficient larger than 0.7, R 2 about 0.7) with the classical FFT approach and PLM measurements. A fast and operator independent method to identify collagen organization in the arterial wall was developed and validated. This overcomes severe limitations of currently applied methods like PLM to identify collagen organization in the arterial wall.
Czech abstract
článek pojednává o algoritmu, který je schopen automaticky identifikovat rozložení kolagenu ve stěně tepny z histologických řezů
English abstract
Arterial physiology relies on a delicate three-dimensional (3D) organization of cells and extracellular matrix, which is remarkably altered by vascular diseases like abdominal aortic aneurysms (AAA). The ability to explore the micro-histology of the aorta wall is important in the study of vascular pathologies and in the development of vascular constitutive models, i.e., mathematical descriptions of biomechanical properties of the wall. The present study reports and validates a fast image processing sequence capable of quantifying collagen fiber organization from histological stains. Powering and re-normalizing the histogram of the classical fast Fourier transformation (FFT) is a key step in the proposed analysis sequence. This modification introduces a powering parameter w, which was calibrated to best fit the reference data obtained using classical FFT and polarized light microscopy (PLM) of stained histological slices of AAA wall samples. The values of w = 3 and 7 give the best correlation (Pearson's correlation coefficient larger than 0.7, R 2 about 0.7) with the classical FFT approach and PLM measurements. A fast and operator independent method to identify collagen organization in the arterial wall was developed and validated. This overcomes severe limitations of currently applied methods like PLM to identify collagen organization in the arterial wall.
Keywords in Czech
rychlá Fourierova tranformace, organizace kolagenu, rozptyl kolagenu, polarizační mikroskopie
Keywords in English
fast Fourier Tranform, collagen organization, collagen dispersion, polarized light microscopy
RIV year
2013
Released
13.11.2013
Publisher
Cambridge Journals
Location
USA
ISSN
1431-9276
Volume
19
Number
6
Pages from–to
1395–1404
Pages count
10
BIBTEX
@article{BUT101972,
author="Stanislav {Polzer} and Thomas Christian {Gasser} and Caroline {Forsell} and Hana {Druckmüllerová} and Michal {Tichý} and Robert {Staffa} and Robert {Vlachovský} and Jiří {Burša},
title="Automatic Identification and Validation of Planar Collagen Organization in the Aorta Wall with Application to Abdominal Aortic Aneurysm",
year="2013",
volume="19",
number="6",
month="November",
pages="1395--1404",
publisher="Cambridge Journals",
address="USA",
issn="1431-9276"
}